Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase gale | CHN51_RS04815 | Not Available | - | 1001125 - 1002129 | 36211.0 |
| duf4136 domain-containing protein | CHN51_RS04820 | Not Available | + | 1002349 - 1002891 | 18771.0 |
| m14-type cytosolic carboxypeptidase | CHN51_RS04825 | Not Available | + | 1002888 - 1004012 | 41732.6 |
| pin domain-containing protein | CHN51_RS04830 | Not Available | - | 1004141 - 1004689 | 20665.8 |
| helix-turn-helix domain-containing protein | CHN51_RS04835 | Not Available | - | 1004712 - 1005158 | 16605.0 |
| hypothetical protein | CHN51_RS04840 | Not Available | - | 1005569 - 1005790 | 7949.11 |
| sos response-associated peptidase family protein | CHN51_RS04845 | Not Available | - | 1005965 - 1006552 | 22130.8 |
| hypothetical protein | CHN51_RS04850 | Not Available | - | 1006545 - 1007171 | 23632.2 |
| hypothetical protein | CHN51_RS19470 | Not Available | - | 1007309 - 1007926 | 22394.9 |
| winged helix-turn-helix domain-containing protein | CHN51_RS04860 | Not Available | - | 1007926 - 1008510 | 21748.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.