Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crossover junction endodeoxyribonuclease ruvc | CHN51_RS04765 | Not Available | - | 995651 - 996121 | 16375.1 |
| duf3147 family protein | CHN51_RS04770 | Not Available | - | 996137 - 996487 | 12656.1 |
| yebc/pmpr family dna-binding transcriptional regulator | CHN51_RS04775 | Not Available | - | 996487 - 997236 | 27147.4 |
| heavy metal-binding domain-containing protein | CHN51_RS04780 | Not Available | - | 997260 - 997592 | 11541.9 |
| gnat family n-acetyltransferase | CHN51_RS04785 | Not Available | - | 997644 - 998132 | 17788.2 |
| duf2312 domain-containing protein | CHN51_RS04790 | Not Available | - | 998132 - 998374 | 9306.16 |
| duf1244 domain-containing protein | CHN51_RS04795 | Not Available | - | 998419 - 998727 | 11290.3 |
| pyruvate kinase | CHN51_RS04800 | Not Available | + | 998814 - 1000265 | 52421.8 |
| had family hydrolase | CHN51_RS04805 | Not Available | - | 1000262 - 1000870 | 23309.8 |
| type b 50s ribosomal protein l36 | CHN51_RS04810 | Not Available | - | 1000898 - 1001023 | 5070.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.