Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CHN51_RS04715 | Not Available | - | 985396 - 986847 | 53645.9 |
| merc domain-containing protein | CHN51_RS04720 | Not Available | + | 987064 - 987432 | 12726.0 |
| fur family transcriptional regulator | CHN51_RS04725 | Not Available | + | 987479 - 987937 | 16649.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | CHN51_RS04730 | Not Available | + | 988035 - 989963 | 68571.8 |
| pyrimidine 5'-nucleotidase | CHN51_RS04735 | Not Available | + | 990013 - 990696 | 25664.5 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | CHN51_RS04740 | Not Available | + | 990693 - 991529 | 29258.1 |
| carotenoid oxygenase family protein | CHN51_RS04745 | Not Available | + | 991541 - 992989 | 54237.2 |
| holliday junction branch migration dna helicase ruvb | CHN51_RS04750 | Not Available | - | 993156 - 994190 | 37811.5 |
| hypothetical protein | CHN51_RS04755 | Not Available | - | 994187 - 994510 | 12046.1 |
| holliday junction branch migration protein ruva | CHN51_RS04760 | Not Available | - | 994841 - 995446 | 20297.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.