Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CHN51_RS04665 | Not Available | + | 975970 - 977064 | 39954.1 |
| phosphotransferase | CHN51_RS04670 | Not Available | + | 977061 - 978101 | 38458.0 |
| cell division protein zape | CHN51_RS04675 | Not Available | - | 978098 - 979213 | 41514.8 |
| paai family thioesterase | CHN51_RS04680 | Not Available | - | 979210 - 979704 | 18442.2 |
| succinate dehydrogenase iron-sulfur subunit | CHN51_RS04685 | Not Available | - | 979726 - 980508 | 29289.1 |
| alpha/beta hydrolase | CHN51_RS04690 | Not Available | - | 980613 - 981482 | 32034.1 |
| lipopolysaccharide biosynthesis protein | CHN51_RS04695 | Not Available | + | 981730 - 983073 | 48724.9 |
| 30s ribosomal protein s9 | CHN51_RS04700 | Not Available | - | 983128 - 983667 | 19525.3 |
| 50s ribosomal protein l13 | CHN51_RS04705 | Not Available | - | 983667 - 984146 | 17450.2 |
| cox15/ctaa family protein | CHN51_RS04710 | Not Available | - | 984300 - 985334 | 37886.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.