Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trimeric intracellular cation channel family protein | CHN51_RS04615 | Not Available | - | 964071 - 964703 | 21910.3 |
| pepsy domain-containing protein | CHN51_RS04620 | Not Available | - | 964700 - 965374 | 24923.2 |
| amidase family protein | CHN51_RS04625 | Not Available | - | 965405 - 966730 | 46645.2 |
| dihydrolipoyl dehydrogenase | CHN51_RS04630 | Not Available | - | 966826 - 968232 | 49495.8 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | CHN51_RS04635 | Not Available | - | 968333 - 969556 | 43002.3 |
| 2-oxoglutarate dehydrogenase e1 component | CHN51_RS04640 | Not Available | - | 969621 - 972404 | 102807.0 |
| giy-yig nuclease family protein | CHN51_RS04645 | Not Available | - | 972759 - 973052 | 11754.1 |
| succinate--coa ligase subunit alpha | CHN51_RS04650 | Not Available | - | 973170 - 974060 | 30273.6 |
| hypothetical protein | CHN51_RS04655 | Not Available | - | 974104 - 974667 | 21741.8 |
| malate dehydrogenase | CHN51_RS04660 | Not Available | - | 974673 - 975635 | 33539.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.