Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc-binding alcohol dehydrogenase family protein | CHN51_RS04565 | Not Available | - | 955040 - 956059 | 37167.4 |
| chaperonin groel | CHN51_RS04570 | Not Available | - | 956270 - 957922 | 58141.2 |
| co-chaperone groes | CHN51_RS04575 | Not Available | - | 957970 - 958260 | 10387.6 |
| duf2282 domain-containing protein | CHN51_RS04580 | Not Available | + | 958587 - 958880 | 9393.25 |
| duf692 family multinuclear iron-containing protein | CHN51_RS04585 | Not Available | + | 958941 - 959813 | 31706.3 |
| putative dna-binding domain-containing protein | CHN51_RS04590 | Not Available | + | 959797 - 960528 | 26066.3 |
| doxx family protein | CHN51_RS04595 | Not Available | + | 960530 - 960970 | 16295.5 |
| sigma-70 family rna polymerase sigma factor | CHN51_RS04600 | Not Available | + | 960975 - 961499 | 20084.3 |
| nrsf family protein | CHN51_RS04605 | Not Available | + | 961519 - 962154 | 22346.4 |
| signal peptide peptidase sppa | CHN51_RS04610 | Not Available | + | 962212 - 964098 | 66353.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.