Sphingorhabdus sp. YGSMI21

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus sp. YGSMI21
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus sp. YGSMI21

Accession NumberNZ_CP022548.1

Gene Summary

Adenine Count

806054 bp

Thymine Count

812740 bp

Guanine Count

1122214 bp

Cytosine Count

1123168 bp

Genome Length

3864176 bp

Protein-coding Genes

3625 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ggdef domain-containing proteinCHN51_RS04515Not Available-945368 - 94621631839.7
lysr family transcriptional regulatorCHN51_RS04520Not Available-946344 - 94723133594.9
mapeg family proteinCHN51_RS04525Not Available+947401 - 94781714515.4
duf1993 domain-containing proteinCHN51_RS04530Not Available+947854 - 94836918572.3
energy transducer tonbCHN51_RS04535Not Available-948376 - 94909524997.4
dj-1/pfpi family proteinCHN51_RS04540Not Available+949284 - 94996724090.6
mfs transporterCHN51_RS04545Not Available+950020 - 95123443342.4
nadp-dependent oxidoreductaseCHN51_RS04550Not Available-951231 - 95223536007.0
mbl fold metallo-hydrolaseCHN51_RS04555Not Available-952342 - 95341537356.4
l-serine ammonia-lyaseCHN51_RS04560Not Available-953437 - 95481348721.2

Displaying genes 1141 – 1150 of 3914 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites