Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | CHN51_RS04465 | Not Available | - | 934039 - 934671 | 23286.6 |
| mbl fold metallo-hydrolase | CHN51_RS04470 | Not Available | + | 934772 - 935689 | 34175.4 |
| yeee/yede family protein | CHN51_RS04475 | Not Available | + | 935689 - 936129 | 14369.3 |
| duf6691 family protein | CHN51_RS04480 | Not Available | + | 936126 - 936533 | 14052.6 |
| bifunctional protein tyrosine phosphatase family protein/nad(p)/fad-dependent oxidoreductase | CHN51_RS04485 | Not Available | + | 936562 - 938157 | 57351.8 |
| transposase | CHN51_RS04490 | Not Available | + | 938167 - 939936 | 62080.7 |
| cytochrome ubiquinol oxidase subunit i | CHN51_RS04495 | Not Available | + | 939933 - 941354 | 51590.2 |
| cytochrome d ubiquinol oxidase subunit ii | CHN51_RS04500 | Not Available | + | 941351 - 942355 | 36443.9 |
| duf2474 family protein | CHN51_RS04505 | Not Available | + | 942355 - 942504 | 5504.89 |
| dna polymerase i | CHN51_RS04510 | Not Available | - | 942513 - 945317 | 102313.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.