Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase large subunit | CHN51_RS04215 | Not Available | - | 885291 - 886685 | 48986.2 |
| duf3598 domain-containing protein | CHN51_RS04220 | Not Available | - | 886682 - 887182 | 19892.1 |
| alpha/beta hydrolase | CHN51_RS04225 | Not Available | - | 887197 - 888573 | 51277.2 |
| isochorismatase family protein | CHN51_RS04230 | Not Available | + | 888660 - 889340 | 25302.8 |
| polysaccharide deacetylase family protein | CHN51_RS04235 | Not Available | + | 889340 - 890224 | 33636.4 |
| polysaccharide deacetylase family protein | CHN51_RS04240 | Not Available | + | 890221 - 891144 | 34358.8 |
| aldehyde dehydrogenase family protein | CHN51_RS04245 | Not Available | + | 891141 - 892580 | 50962.1 |
| hypothetical protein | CHN51_RS04250 | Not Available | + | 892577 - 893032 | 17933.8 |
| class i sam-dependent methyltransferase | CHN51_RS04255 | Not Available | + | 893044 - 894231 | 43282.8 |
| hypothetical protein | CHN51_RS04260 | Not Available | + | 894228 - 894482 | 9679.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.