Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glsb/yeaq/ymge family stress response membrane protein | CHN51_RS04165 | Not Available | + | 869480 - 869743 | 9199.73 |
| efflux rnd transporter periplasmic adaptor subunit | CHN51_RS04170 | Not Available | + | 869994 - 871172 | 41322.9 |
| efflux rnd transporter permease subunit | CHN51_RS04175 | Not Available | + | 871200 - 874625 | 123704.0 |
| duf445 domain-containing protein | CHN51_RS04180 | Not Available | + | 874700 - 875905 | 44272.7 |
| nad-glutamate dehydrogenase | CHN51_RS04185 | Not Available | - | 875902 - 880578 | 172178.0 |
| hypothetical protein | CHN51_RS04190 | Not Available | - | 880774 - 882129 | 49598.1 |
| Trna-thr | Not Available | Not Available | + | 882361 - 882436 | Not Available |
| caib/baif coa transferase family protein | CHN51_RS04200 | Not Available | - | 882573 - 883748 | 42183.9 |
| hydroxymethylglutaryl-coa lyase | CHN51_RS04205 | Not Available | - | 883745 - 884677 | 32374.0 |
| 3-isopropylmalate dehydratase small subunit | CHN51_RS04210 | Not Available | - | 884674 - 885291 | 22230.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.