Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yihy/virulence factor brkb family protein | CHN51_RS04115 | Not Available | - | 861812 - 862762 | 34733.3 |
| dnaj c-terminal domain-containing protein | CHN51_RS04120 | Not Available | - | 862765 - 863682 | 32633.6 |
| aba4-like family protein | CHN51_RS04125 | Not Available | - | 863752 - 864210 | 16650.8 |
| pyridoxamine 5'-phosphate oxidase | CHN51_RS04130 | Not Available | + | 864312 - 864887 | 21907.4 |
| phzf family phenazine biosynthesis protein | CHN51_RS04135 | Not Available | + | 864884 - 865678 | 28907.0 |
| serine hydrolase domain-containing protein | CHN51_RS04140 | Not Available | - | 865699 - 866841 | 41562.6 |
| hypothetical protein | CHN51_RS04145 | Not Available | + | 866871 - 867239 | 13470.1 |
| trna 2-thiouridine(34) synthase mnma | CHN51_RS04150 | Not Available | - | 867241 - 868362 | 40436.4 |
| hypothetical protein | CHN51_RS04155 | Not Available | + | 868570 - 868896 | 11982.2 |
| duf1153 domain-containing protein | CHN51_RS04160 | Not Available | + | 869015 - 869314 | 11339.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.