Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen synthase | CHN51_RS03905 | Not Available | + | 821857 - 822858 | 36163.0 |
| gnat family n-acetyltransferase | CHN51_RS03910 | Not Available | + | 822851 - 823420 | 21657.6 |
| gamma carbonic anhydrase family protein | CHN51_RS03915 | Not Available | + | 823417 - 823968 | 19255.3 |
| class i sam-dependent methyltransferase | CHN51_RS03920 | Not Available | + | 824028 - 825089 | 37307.1 |
| hypothetical protein | CHN51_RS03925 | Not Available | - | 825118 - 825633 | 18373.7 |
| 50s ribosomal protein l21 | CHN51_RS03935 | Not Available | + | 825851 - 826375 | 18199.1 |
| 50s ribosomal protein l27 | CHN51_RS03940 | Not Available | + | 826379 - 826648 | 9520.5 |
| gnat family n-acetyltransferase | CHN51_RS03945 | Not Available | + | 826846 - 827400 | 20319.0 |
| metal-dependent hydrolase | CHN51_RS03950 | Not Available | - | 827408 - 828370 | 36216.4 |
| trna (guanine(46)-n(7))-methyltransferase trmb | CHN51_RS03955 | Not Available | - | 828562 - 829257 | 26372.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.