Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf6726 family protein | CHN51_RS03805 | Not Available | - | 800869 - 801138 | 9903.84 |
| utp--glucose-1-phosphate uridylyltransferase | CHN51_RS03810 | Not Available | - | 801188 - 802057 | 31538.5 |
| peptide-methionine (s)-s-oxide reductase msra | CHN51_RS03815 | Not Available | - | 802067 - 802600 | 19372.5 |
| efflux rnd transporter permease subunit | CHN51_RS03820 | Not Available | - | 802611 - 805688 | 111700.0 |
| efflux rnd transporter periplasmic adaptor subunit | CHN51_RS03825 | Not Available | - | 805725 - 806777 | 37398.9 |
| aquaporin z | CHN51_RS03830 | Not Available | - | 806913 - 807635 | 24231.9 |
| l-threonylcarbamoyladenylate synthase | CHN51_RS03835 | Not Available | - | 807752 - 808711 | 33085.4 |
| acyl-coa dehydrogenase | CHN51_RS03840 | Not Available | + | 808764 - 810515 | 61930.6 |
| atp-binding protein | CHN51_RS03845 | Not Available | + | 810518 - 811348 | 30620.2 |
| pqq-dependent sugar dehydrogenase | CHN51_RS03850 | Not Available | - | 811350 - 812708 | 49572.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.