Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative bacteriotail tape measure protein | RPYSC3_RS09600 | Not Available | + | 2070124 - 2070711 | 19770.6 |
| Tail protein | RPYSC3_RS09605 | Not Available | + | 2070852 - 2071490 | 22578.8 |
| chromosomal replication initiator protein dnaa | RPYSC3_RS00005 | Not Available | + | 679 - 2097 | 52588.0 |
| dna polymerase iii subunit beta | RPYSC3_RS00010 | Not Available | + | 2339 - 3457 | 40430.4 |
| dna replication/repair protein recf | RPYSC3_RS00015 | Not Available | + | 3659 - 4798 | 40593.5 |
| dna topoisomerase (atp-hydrolyzing) subunit b | RPYSC3_RS00020 | Not Available | + | 5015 - 7456 | 89496.6 |
| carboxymuconolactone decarboxylase family protein | RPYSC3_RS00030 | Not Available | - | 7735 - 8853 | 40626.1 |
| lrp/asnc family transcriptional regulator | RPYSC3_RS00035 | Not Available | + | 8980 - 9459 | 17549.1 |
| hwe histidine kinase domain-containing protein | RPYSC3_RS00040 | Not Available | - | 9505 - 10953 | 51039.0 |
| circadian clock kaib family protein | RPYSC3_RS00045 | Not Available | - | 10953 - 11237 | 10258.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
