Histophilus somni strain USDA-ARS-USMARC-63255

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni strain USDA-ARS-USMARC-63255 is a Gram-negative, rod-shaped bacterium that exhibits both aerobic and facultative anaerobic metabolic capabilities. This strain thrives optimally at a temperature of 35.0°C, suggesting a preference for warm-blooded hosts within its ecological niche. As a host-associated microbe, H. somni is typically found in the respiratory and reproductive tracts of its hosts, indicating its possible role in the microbial communities associated with these environments. The dual oxygen requirement of this strain allows it to adapt to varying oxygen levels within its host, which may facilitate its persistence in diverse anatomical sites. The adaptation to host-associated habitats and the ability to function in both aerobic and anaerobic conditions may provide insights into its metabolic versatility and ecological interactions within the host environment. Understanding these traits is crucial for further investigations into the ecological roles and potential impacts of H. somni in its host's microbiome.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
Strainstrain USDA-ARS-USMARC-63255

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni strain USDA-ARS-USMARC-63255


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinBTV19_RS02135Not Available+419656 - 42010517460.7
Hypothetical proteinBTV19_RS02140Not Available+420169 - 42214872890.2
Tail fibersBTV19_RS02145Not Available+422141 - 42432481236.6
Putative tail fiber assembly proteinBTV19_RS02150Not Available+424321 - 42493523816.9
Hypothetical proteinBTV19_RS02155Not Available+424928 - 42521211064.4
Is150 transposase bBTV19_RS10360Not Available-1869265 - 186965114966.1
Hypothetical proteinBTV19_RS08545Not Available-1870127 - 187092430225.3
dna-binding proteinBTV19_RS08550Not Available+1871047 - 18713109776.92
TransposaseBTV19_RS08555Not Available+1871320 - 187327772989.3
Phage transposaseBTV19_RS08560Not Available+1873281 - 187416232279.4

Displaying genes 31 – 40 of 2014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites