Histophilus somni strain USDA-ARS-USMARC-63255

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni strain USDA-ARS-USMARC-63255 is a Gram-negative, rod-shaped bacterium that exhibits both aerobic and facultative anaerobic metabolic capabilities. This strain thrives optimally at a temperature of 35.0°C, suggesting a preference for warm-blooded hosts within its ecological niche. As a host-associated microbe, H. somni is typically found in the respiratory and reproductive tracts of its hosts, indicating its possible role in the microbial communities associated with these environments. The dual oxygen requirement of this strain allows it to adapt to varying oxygen levels within its host, which may facilitate its persistence in diverse anatomical sites. The adaptation to host-associated habitats and the ability to function in both aerobic and anaerobic conditions may provide insights into its metabolic versatility and ecological interactions within the host environment. Understanding these traits is crucial for further investigations into the ecological roles and potential impacts of H. somni in its host's microbiome.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni strain USDA-ARS-USMARC-63255


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Dna-damage-inducible protein dBTV19_RS01995Not Available-392237 - 39307631519.5
Ci repressorBTV19_RS02000Not Available-393133 - 39381925758.7
Regulatory protein croBTV19_RS02005Not Available+393922 - 3941498277.83
Hypothetical proteinBTV19_RS02010Not Available+394305 - 3945449082.92
Hypothetical proteinBTV19_RS02015Not Available+394534 - 39535831326.5
Possible bacteriophage replication protein pBTV19_RS02020Not Available+395355 - 39604725832.9
Dna n-6-adenine-methyltransferaseBTV19_RS02025Not Available+396057 - 39658720235.3
Hypothetical proteinBTV19_RS02030Not Available+396624 - 39725023997.6
hypothetical proteinBTV19_RS02035Not Available+397263 - 39754111001.6
Ning recombination proteinBTV19_RS02040Not Available+397620 - 39820722928.8

Displaying genes 1 – 10 of 2014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites