Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cupin-like domain-containing protein | BJD13_RS01630 | Not Available | + | 13909 - 14961 | 38080.4 |
| tryptophan halogenase family protein | BJD13_RS01635 | Not Available | + | 15002 - 16519 | 56875.9 |
| mbl fold metallo-hydrolase | BJD13_RS01645 | Not Available | - | 16822 - 17829 | 36072.7 |
| hypothetical protein | BJD13_RS01650 | Not Available | - | 17966 - 18364 | 14968.0 |
| trypsin-like serine peptidase | BJD13_RS01660 | Not Available | - | 18767 - 20164 | 48489.9 |
| xopap family type iii secretion system effector | BJD13_RS01675 | Not Available | + | 20536 - 21930 | 50904.9 |
| hypothetical protein | BJD13_RS01680 | Not Available | - | 22031 - 22204 | 6185.65 |
| apc family permease | BJD13_RS01685 | Not Available | - | 22281 - 23663 | 49536.6 |
| luxr family transcriptional regulator | BJD13_RS01690 | Not Available | + | 23856 - 24620 | 28144.8 |
| proline iminopeptidase-family hydrolase | BJD13_RS01700 | Not Available | + | 25002 - 25943 | 34516.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.