Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Phage-encoded membrane protein | BJD13_RS20080 | Not Available | - | 4110285 - 4110641 | 11999.7 |
| Tail protein | BJD13_RS20085 | Not Available | - | 4110646 - 4110855 | 7496.13 |
| Predicted capsid completion protein | BJD13_RS20090 | Not Available | - | 4110855 - 4111322 | 16771.7 |
| Terminase endonuclease subunit | BJD13_RS20095 | Not Available | - | 4111421 - 4112140 | 25397.4 |
| Capsid protein | BJD13_RS20100 | Not Available | - | 4112144 - 4113163 | 37608.6 |
| Gpo family capsid scaffolding protein | BJD13_RS20105 | Not Available | - | 4113210 - 4114052 | 30494.7 |
| Terminase large subunit | BJD13_RS20110 | Not Available | + | 4114195 - 4115958 | 66945.2 |
| Portal protein | BJD13_RS20115 | Not Available | + | 4115958 - 4116980 | 37766.1 |
| Hypothetical protein | BJD13_RS20120 | Not Available | + | 4117006 - 4117251 | 9181.0 |
| Site-specific dna-methyltransferase | BJD13_RS20125 | Not Available | + | 4117169 - 4117870 | 25831.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.