Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB140_RS03665 | Not Available | - | 764975 - 765496 | 19625.9 |
| yhyh protein | LPB140_RS03670 | Not Available | - | 765493 - 766881 | 47576.6 |
| fibronectin type iii domain-containing protein | LPB140_RS03675 | Not Available | + | 767107 - 768201 | 37229.8 |
| toxin-antitoxin system ywqk family antitoxin | LPB140_RS03680 | Not Available | + | 768212 - 768814 | 22484.8 |
| sco family protein | LPB140_RS03685 | Not Available | - | 768853 - 769587 | 27547.6 |
| lytic transglycosylase domain-containing protein | LPB140_RS03690 | Not Available | + | 769902 - 770504 | 22202.5 |
| trbc/virb2 family protein | LPB140_RS03695 | Not Available | + | 770501 - 770815 | 10570.2 |
| type iv secretion system protein virb3 | LPB140_RS03700 | Not Available | + | 770822 - 771103 | 11009.8 |
| virb4 family type iv secretion/conjugal transfer atpase | LPB140_RS03705 | Not Available | + | 771152 - 773614 | 91286.2 |
| type iv secretion system protein | LPB140_RS03710 | Not Available | + | 773611 - 774828 | 42535.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.