Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter outer membrane subunit | LPB140_RS03100 | Not Available | - | 629124 - 630572 | 51997.7 |
| dha2 family efflux mfs transporter permease subunit | LPB140_RS03105 | Not Available | - | 630581 - 632158 | 56325.6 |
| hlyd family secretion protein | LPB140_RS03110 | Not Available | - | 632191 - 633477 | 46533.0 |
| hypothetical protein | LPB140_RS03115 | Not Available | + | 633887 - 635404 | 51186.3 |
| tonb-dependent receptor domain-containing protein | LPB140_RS03120 | Not Available | + | 635483 - 638248 | 100458.0 |
| type ii secretion system protein n | LPB140_RS03125 | Not Available | + | 638496 - 639290 | 28089.9 |
| type ii secretion system secretin gspd | LPB140_RS03130 | Not Available | + | 639317 - 641518 | 77295.6 |
| gspe/pule family protein | LPB140_RS03135 | Not Available | + | 641683 - 643167 | 53735.2 |
| type ii secretion system inner membrane protein gspf | LPB140_RS03140 | Not Available | + | 643168 - 644418 | 46412.3 |
| type ii secretion system major pseudopilin gspg | LPB140_RS03145 | Not Available | + | 644420 - 644893 | 16918.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.