Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator nrdr | LPB140_RS08820 | Not Available | + | 1856929 - 1857393 | 17567.9 |
| rna methyltransferase | LPB140_RS08825 | Not Available | + | 1857403 - 1858158 | 27498.9 |
| chorismate mutase | LPB140_RS08830 | Not Available | - | 1858183 - 1858503 | 12062.5 |
| 30s ribosomal protein s4 | LPB140_RS08835 | Not Available | + | 1858721 - 1859335 | 23309.2 |
| m28 family metallopeptidase | LPB140_RS08840 | Not Available | + | 1859474 - 1861147 | 60191.8 |
| agmatine deiminase family protein | LPB140_RS08845 | Not Available | + | 1861216 - 1862223 | 36424.9 |
| class i sam-dependent methyltransferase | LPB140_RS08850 | Not Available | + | 1862298 - 1863158 | 32022.2 |
| n-carbamoylputrescine amidase | LPB140_RS08855 | Not Available | + | 1863192 - 1864055 | 31844.7 |
| hypothetical protein | LPB140_RS08860 | Not Available | + | 1864052 - 1864468 | 15181.2 |
| uracil-dna glycosylase | LPB140_RS08865 | Not Available | - | 1864461 - 1865135 | 24823.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.