Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase 2 family protein | LPB140_RS08665 | Not Available | - | 1825817 - 1826590 | 29815.5 |
| aspartate--trna ligase | LPB140_RS08670 | Not Available | - | 1826674 - 1828458 | 66447.1 |
| ribonuclease d | LPB140_RS08675 | Not Available | + | 1828563 - 1829825 | 47051.3 |
| ppx/gppa family phosphatase | LPB140_RS08680 | Not Available | - | 1829901 - 1831448 | 56245.3 |
| rna degradosome polyphosphate kinase | LPB140_RS08685 | Not Available | - | 1831462 - 1833654 | 83077.2 |
| hdaa/dnaa family protein | LPB140_RS08690 | Not Available | - | 1833662 - 1834261 | 22502.3 |
| heavy-metal-associated domain-containing protein | LPB140_RS08695 | Not Available | - | 1834289 - 1835491 | 43216.9 |
| phosphoribosylformylglycinamidine cyclo-ligase | LPB140_RS08700 | Not Available | + | 1835555 - 1836661 | 38947.7 |
| phosphoribosylglycinamide formyltransferase | LPB140_RS08705 | Not Available | + | 1836654 - 1837619 | 35745.1 |
| nucleoside-diphosphate kinase | LPB140_RS08710 | Not Available | - | 1837677 - 1838099 | 15190.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.