Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyl-amp cyclohydrolase | LPB140_RS08465 | Not Available | - | 1781562 - 1781951 | 14246.0 |
| amidophosphoribosyltransferase | LPB140_RS08470 | Not Available | + | 1782102 - 1783577 | 53663.0 |
| sdr family nad(p)-dependent oxidoreductase | LPB140_RS08475 | Not Available | + | 1783584 - 1784294 | 24941.3 |
| cryptochrome/photolyase family protein | LPB140_RS08480 | Not Available | - | 1784291 - 1785688 | 53081.9 |
| metal-dependent hydrolase | LPB140_RS08485 | Not Available | - | 1785678 - 1786766 | 41197.3 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | LPB140_RS08490 | Not Available | - | 1786766 - 1787809 | 37617.8 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | LPB140_RS08495 | Not Available | - | 1787806 - 1789680 | 66900.0 |
| rna pyrophosphohydrolase | LPB140_RS08500 | Not Available | + | 1789863 - 1790360 | 19083.4 |
| tetratricopeptide repeat protein | LPB140_RS08505 | Not Available | - | 1790411 - 1790992 | 21571.2 |
| rsmb/nop family class i sam-dependent rna methyltransferase | LPB140_RS08510 | Not Available | - | 1790955 - 1792166 | 44046.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.