Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2238 domain-containing protein | LPB140_RS08265 | Not Available | - | 1740658 - 1741284 | 24003.7 |
| aspartate-semialdehyde dehydrogenase | LPB140_RS08270 | Not Available | - | 1741289 - 1742314 | 37271.6 |
| 50s ribosomal protein l19 | LPB140_RS08275 | Not Available | - | 1742422 - 1742814 | 14562.8 |
| trna (guanosine(37)-n1)-methyltransferase trmd | LPB140_RS08280 | Not Available | - | 1742811 - 1743557 | 27239.5 |
| ribosome maturation factor rimm | LPB140_RS08285 | Not Available | - | 1743568 - 1744053 | 17772.7 |
| 30s ribosomal protein s16 | LPB140_RS08290 | Not Available | - | 1744057 - 1744485 | 15280.8 |
| signal recognition particle protein | LPB140_RS08295 | Not Available | - | 1744532 - 1745995 | 51377.9 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | LPB140_RS08300 | Not Available | + | 1746343 - 1747992 | 60877.8 |
| diaminopimelate epimerase | LPB140_RS08305 | Not Available | + | 1748078 - 1748899 | 29504.3 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | LPB140_RS08310 | Not Available | + | 1748899 - 1750149 | 46370.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.