Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | LPB140_RS08120 | Not Available | + | 1701808 - 1702989 | 45665.4 |
| anhydro-n-acetylmuramic acid kinase | LPB140_RS08125 | Not Available | - | 1703001 - 1704110 | 40298.3 |
| tyrosine--trna ligase | LPB140_RS08130 | Not Available | + | 1704138 - 1705373 | 45565.4 |
| pilz domain-containing protein | LPB140_RS08135 | Not Available | + | 1705477 - 1705800 | 12294.0 |
| atp-dependent dna helicase recg | LPB140_RS08140 | Not Available | - | 1705819 - 1707888 | 77047.6 |
| succinate dehydrogenase assembly factor 2 | LPB140_RS08145 | Not Available | + | 1708005 - 1708292 | 11303.4 |
| transcription-repair coupling factor | LPB140_RS08150 | Not Available | + | 1708324 - 1711788 | 130338.0 |
| ggdef domain-containing phosphodiesterase | LPB140_RS08155 | Not Available | - | 1711785 - 1713539 | 64858.8 |
| nad kinase | LPB140_RS08160 | Not Available | + | 1713646 - 1714422 | 28871.1 |
| Trna-asn | Not Available | Not Available | + | 1714486 - 1714560 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.