Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | LPB140_RS07970 | Not Available | + | 1668023 - 1670803 | 102098.0 |
| lysoplasmalogenase family protein | LPB140_RS07975 | Not Available | - | 1670845 - 1671537 | 26385.6 |
| methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfo | LPB140_RS07980 | Not Available | + | 1671634 - 1672968 | 49041.8 |
| ef-hand domain-containing protein | LPB140_RS07985 | Not Available | - | 1672982 - 1673449 | 17160.3 |
| hypothetical protein | LPB140_RS07990 | Not Available | - | 1673523 - 1674203 | 26019.5 |
| tade/tadg family type iv pilus assembly protein | LPB140_RS07995 | Not Available | + | 1674355 - 1676295 | 69895.7 |
| tade family protein | LPB140_RS08000 | Not Available | + | 1676292 - 1677644 | 50709.4 |
| tade/tadg family type iv pilus assembly protein | LPB140_RS08005 | Not Available | + | 1677686 - 1678390 | 25488.9 |
| pyruvate dehydrogenase complex e1 component subunit beta | LPB140_RS08010 | Not Available | - | 1678464 - 1679834 | 48707.5 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | LPB140_RS08015 | Not Available | - | 1679834 - 1680841 | 37028.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.