Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sodium-dependent bicarbonate transport family permease | LPB140_RS07870 | Not Available | + | 1648245 - 1649213 | 33734.6 |
| p-ii family nitrogen regulator | LPB140_RS07875 | Not Available | + | 1649216 - 1649527 | 11296.8 |
| carbonic anhydrase | LPB140_RS07880 | Not Available | + | 1649527 - 1650150 | 22728.1 |
| sodium/proline symporter putp | LPB140_RS07885 | Not Available | + | 1650232 - 1651671 | 50923.3 |
| sterol desaturase family protein | LPB140_RS07890 | Not Available | - | 1651687 - 1652625 | 36090.4 |
| marr family winged helix-turn-helix transcriptional regulator | LPB140_RS07895 | Not Available | + | 1652831 - 1653190 | 13958.0 |
| helix-turn-helix transcriptional regulator | LPB140_RS07900 | Not Available | - | 1653253 - 1654002 | 28457.5 |
| energy-dependent translational throttle protein etta | LPB140_RS07905 | Not Available | - | 1654216 - 1655895 | 62217.9 |
| m28 family peptidase | LPB140_RS07910 | Not Available | + | 1656050 - 1657435 | 48666.0 |
| hypothetical protein | LPB140_RS07915 | Not Available | + | 1657432 - 1657701 | 9789.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.