Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna chaperone hfq | LPB140_RS07820 | Not Available | - | 1637096 - 1637581 | 18326.1 |
| sigma-54-dependent transcriptional regulator | LPB140_RS07825 | Not Available | - | 1637674 - 1639047 | 50853.0 |
| atp-binding protein | LPB140_RS07830 | Not Available | - | 1639047 - 1641314 | 83922.7 |
| sigma-54-dependent transcriptional regulator | LPB140_RS07835 | Not Available | - | 1641417 - 1642829 | 52299.3 |
| two-component system sensor histidine kinase ntrb | LPB140_RS07840 | Not Available | - | 1642826 - 1643950 | 41766.7 |
| trna dihydrouridine synthase dusb | LPB140_RS07845 | Not Available | - | 1643954 - 1644949 | 36077.8 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | LPB140_RS07850 | Not Available | + | 1645038 - 1646222 | 43207.3 |
| cina family protein | LPB140_RS07855 | Not Available | + | 1646219 - 1646746 | 18297.0 |
| type ii toxin-antitoxin system rata family toxin | LPB140_RS07860 | Not Available | - | 1646779 - 1647216 | 17007.4 |
| lipoyl synthase | LPB140_RS07865 | Not Available | - | 1647218 - 1648159 | 34921.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.