Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | LPB140_RS07775 | Not Available | + | 1627405 - 1628424 | 37526.2 |
| septal ring lytic transglycosylase rlpa family protein | LPB140_RS12450 | Not Available | + | 1628408 - 1629451 | 36963.8 |
| d-alanyl-d-alanine carboxypeptidase family protein | LPB140_RS07785 | Not Available | + | 1629491 - 1630639 | 41563.1 |
| dtmp kinase | LPB140_RS07790 | Not Available | + | 1630657 - 1631298 | 23453.9 |
| aaa family atpase | LPB140_RS07795 | Not Available | + | 1631295 - 1632263 | 36801.6 |
| methionine--trna ligase | LPB140_RS07800 | Not Available | + | 1632299 - 1633864 | 59444.8 |
| tatd family hydrolase | LPB140_RS07805 | Not Available | + | 1633874 - 1634650 | 28758.2 |
| hypothetical protein | LPB140_RS12360 | Not Available | + | 1634662 - 1634829 | 5844.54 |
| nucleoside triphosphate pyrophosphohydrolase | LPB140_RS07810 | Not Available | + | 1634941 - 1635750 | 31475.1 |
| gtpase hflx | LPB140_RS07815 | Not Available | - | 1635747 - 1637099 | 50310.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.