Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase family protein | LPB140_RS07430 | Not Available | - | 1556768 - 1557976 | 44499.3 |
| threonine/serine dehydratase | LPB140_RS07435 | Not Available | + | 1558032 - 1559036 | 35673.4 |
| 5-aminolevulinate synthase | LPB140_RS07440 | Not Available | - | 1559104 - 1560324 | 44345.2 |
| glutamate racemase | LPB140_RS07445 | Not Available | - | 1560426 - 1561271 | 30569.2 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | LPB140_RS07450 | Not Available | + | 1561413 - 1562018 | 21159.6 |
| dna-processing protein dpra | LPB140_RS07455 | Not Available | + | 1562020 - 1563192 | 42124.1 |
| type i dna topoisomerase | LPB140_RS07460 | Not Available | + | 1563295 - 1565931 | 96365.8 |
| gtpase era | LPB140_RS07465 | Not Available | - | 1565956 - 1566891 | 34147.9 |
| ribonuclease iii | LPB140_RS07470 | Not Available | - | 1566891 - 1567580 | 25690.8 |
| signal peptidase i | LPB140_RS07475 | Not Available | - | 1567577 - 1568404 | 30728.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.