Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | LPB140_RS07380 | Not Available | + | 1547353 - 1548195 | 30291.8 |
| n-formylglutamate amidohydrolase | LPB140_RS07385 | Not Available | + | 1548192 - 1548908 | 26576.4 |
| dihydroxy-acid dehydratase | LPB140_RS07390 | Not Available | + | 1548966 - 1550693 | 60929.8 |
| hypothetical protein | LPB140_RS07395 | Not Available | + | 1550680 - 1551117 | 16058.2 |
| class i sam-dependent rna methyltransferase | LPB140_RS07400 | Not Available | + | 1551117 - 1552337 | 45023.2 |
| carbon-nitrogen hydrolase family protein | LPB140_RS07405 | Not Available | - | 1552348 - 1553292 | 34885.8 |
| mapeg family protein | LPB140_RS07410 | Not Available | - | 1553327 - 1553749 | 16044.3 |
| mapeg family protein | LPB140_RS07415 | Not Available | - | 1553763 - 1554191 | 15932.3 |
| type iii plp-dependent enzyme | LPB140_RS07420 | Not Available | - | 1554269 - 1555462 | 43396.1 |
| carboxynorspermidine decarboxylase | LPB140_RS07425 | Not Available | - | 1555614 - 1556768 | 42956.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.