Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein-releasing abc transporter permease subunit | LPB140_RS07330 | Not Available | + | 1534061 - 1535302 | 45158.4 |
| abc transporter atp-binding protein | LPB140_RS07335 | Not Available | + | 1535295 - 1535969 | 24469.5 |
| glutathione peroxidase | LPB140_RS07340 | Not Available | + | 1535995 - 1536477 | 17799.4 |
| dna polymerase iii subunit alpha | LPB140_RS07345 | Not Available | + | 1536555 - 1540046 | 128958.0 |
| long-chain fatty acid--coa ligase | LPB140_RS07350 | Not Available | + | 1540070 - 1541665 | 58770.8 |
| duf1330 domain-containing protein | LPB140_RS07355 | Not Available | + | 1541668 - 1542081 | 15663.6 |
| peptide-methionine (s)-s-oxide reductase msra | LPB140_RS07360 | Not Available | + | 1542195 - 1542836 | 24000.3 |
| lytic transglycosylase domain-containing protein | LPB140_RS07365 | Not Available | - | 1542865 - 1544670 | 66506.0 |
| uracil-dna glycosylase family protein | LPB140_RS07370 | Not Available | - | 1544680 - 1545513 | 31451.9 |
| tetratricopeptide repeat protein | LPB140_RS07375 | Not Available | + | 1545682 - 1547343 | 61913.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.