Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | + | 1450122 - 1450211 | Not Available |
| tyrosine-type recombinase/integrase | LPB140_RS06930 | Not Available | + | 1450353 - 1451495 | 42586.8 |
| hypothetical protein | LPB140_RS06935 | Not Available | + | 1451488 - 1452309 | 31205.0 |
| excisionase family dna-binding protein | LPB140_RS06940 | Not Available | + | 1452481 - 1452681 | 7403.98 |
| helix-turn-helix domain-containing protein | LPB140_RS12340 | Not Available | + | 1452843 - 1453070 | 8364.02 |
| pc4/ydbc family ssdna-binding protein | LPB140_RS06950 | Not Available | + | 1453070 - 1453315 | 9266.05 |
| hypothetical protein | LPB140_RS06955 | Not Available | + | 1453616 - 1454236 | 22397.3 |
| response regulator | LPB140_RS06960 | Not Available | - | 1454385 - 1455044 | 23465.3 |
| sensor histidine kinase | LPB140_RS06965 | Not Available | - | 1455115 - 1456992 | 68918.2 |
| hypothetical protein | LPB140_RS06970 | Not Available | + | 1457288 - 1457608 | 11238.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.