Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein reco | LPB140_RS06875 | Not Available | + | 1440166 - 1440906 | 27371.2 |
| 3-isopropylmalate dehydrogenase | LPB140_RS06880 | Not Available | + | 1440934 - 1441983 | 37343.1 |
| trans-sulfuration enzyme family protein | LPB140_RS06885 | Not Available | + | 1442030 - 1443241 | 43749.2 |
| co2+/mg2+ efflux protein apag | LPB140_RS06890 | Not Available | + | 1443238 - 1443645 | 15074.9 |
| lysr family transcriptional regulator | LPB140_RS06895 | Not Available | + | 1443658 - 1444449 | 28980.9 |
| gnat family n-acetyltransferase | LPB140_RS06900 | Not Available | + | 1444446 - 1444994 | 20886.7 |
| serine hydrolase | LPB140_RS06905 | Not Available | - | 1445008 - 1446357 | 49536.9 |
| dna topoisomerase iv subunit b | LPB140_RS06910 | Not Available | - | 1446350 - 1448338 | 72891.5 |
| gcra family cell cycle regulator | LPB140_RS06915 | Not Available | - | 1448440 - 1449099 | 23370.4 |
| abc transporter permease | LPB140_RS06920 | Not Available | + | 1449232 - 1450026 | 28758.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.