Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-f family atp-binding cassette domain-containing protein | LPB140_RS06625 | Not Available | - | 1391333 - 1393147 | 67426.4 |
| simpl domain-containing protein | LPB140_RS06630 | Not Available | - | 1393244 - 1393987 | 27047.3 |
| pepsy domain-containing protein | LPB140_RS06635 | Not Available | + | 1394100 - 1394432 | 12513.4 |
| response regulator transcription factor | LPB140_RS06640 | Not Available | + | 1394555 - 1395220 | 24562.2 |
| sensor histidine kinase | LPB140_RS06645 | Not Available | + | 1395325 - 1396683 | 49932.8 |
| chorismate mutase | LPB140_RS06650 | Not Available | - | 1396690 - 1396974 | 10973.2 |
| polyprenyl synthetase family protein | LPB140_RS06655 | Not Available | + | 1397070 - 1398083 | 36522.8 |
| atp-dependent helicase hrpb | LPB140_RS06660 | Not Available | + | 1398140 - 1400617 | 90072.7 |
| nadh dehydrogenase ubiquinone fe-s protein 4 | LPB140_RS06665 | Not Available | + | 1400694 - 1400990 | 10929.1 |
| nudix hydrolase | LPB140_RS06670 | Not Available | - | 1401002 - 1401520 | 19083.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.