Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| holin family protein | LPB140_RS06575 | Not Available | - | 1383715 - 1384128 | 15319.8 |
| glycoside hydrolase family 108 protein | LPB140_RS06580 | Not Available | - | 1384181 - 1384717 | 20227.3 |
| Trna-pro | Not Available | Not Available | + | 1384933 - 1385009 | Not Available |
| preprotein translocase subunit yajc | LPB140_RS06590 | Not Available | + | 1385411 - 1385725 | 11101.5 |
| protein translocase subunit secd | LPB140_RS06595 | Not Available | + | 1385803 - 1387401 | 56910.3 |
| protein translocase subunit secf | LPB140_RS06600 | Not Available | + | 1387414 - 1388403 | 36325.8 |
| mth938-like domain-containing protein | LPB140_RS06605 | Not Available | + | 1388428 - 1388811 | 14192.3 |
| glycosyltransferase | LPB140_RS06610 | Not Available | - | 1388838 - 1390031 | 42820.5 |
| helix-turn-helix domain-containing protein | LPB140_RS06615 | Not Available | - | 1390086 - 1390652 | 21008.8 |
| duf6456 domain-containing protein | LPB140_RS06620 | Not Available | + | 1390752 - 1391270 | 19345.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.