Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | LPB140_RS06525 | Not Available | + | 1371425 - 1372717 | 48791.2 |
| o-antigen ligase family protein | LPB140_RS06530 | Not Available | - | 1372773 - 1374224 | 53173.7 |
| hypothetical protein | LPB140_RS06535 | Not Available | - | 1374239 - 1375429 | 43891.8 |
| gumc family protein | LPB140_RS06540 | Not Available | - | 1375520 - 1377691 | 79638.6 |
| polysaccharide biosynthesis/export family protein | LPB140_RS06545 | Not Available | - | 1377699 - 1378421 | 25702.4 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | LPB140_RS06550 | Not Available | - | 1378569 - 1379726 | 43863.6 |
| nad-dependent epimerase/dehydratase family protein | LPB140_RS06555 | Not Available | - | 1379756 - 1380892 | 41418.9 |
| sdr family nad(p)-dependent oxidoreductase | LPB140_RS06560 | Not Available | - | 1380892 - 1381923 | 38324.0 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | LPB140_RS06565 | Not Available | + | 1382097 - 1383251 | 43103.8 |
| hypothetical protein | LPB140_RS06570 | Not Available | - | 1383382 - 1383582 | 6626.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.