Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | LPB140_RS06475 | Not Available | + | 1361336 - 1362277 | 35212.8 |
| acyltransferase | LPB140_RS06480 | Not Available | + | 1362279 - 1362857 | 20481.6 |
| degt/dnrj/eryc1/strs family aminotransferase | LPB140_RS06485 | Not Available | + | 1362829 - 1363941 | 40500.4 |
| lipopolysaccharide biosynthesis protein | LPB140_RS06490 | Not Available | + | 1363989 - 1365272 | 48055.3 |
| o-antigen ligase family protein | LPB140_RS06495 | Not Available | + | 1365292 - 1366476 | 45692.5 |
| glycosyltransferase | LPB140_RS06500 | Not Available | + | 1366492 - 1367709 | 45787.2 |
| glycosyltransferase family 4 protein | LPB140_RS12595 | Not Available | + | 1367751 - 1368848 | 42150.9 |
| n-acetyl sugar amidotransferase | LPB140_RS06510 | Not Available | + | 1368865 - 1370019 | 44723.5 |
| imidazole glycerol phosphate synthase subunit hish | LPB140_RS06515 | Not Available | + | 1370016 - 1370630 | 22652.1 |
| aglz/hisf2 family acetamidino modification protein | LPB140_RS06520 | Not Available | + | 1370632 - 1371432 | 28338.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.