Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyrate dehydrogenase | LPB140_RS06425 | Not Available | + | 1349449 - 1350243 | 28225.1 |
| amidohydrolase | LPB140_RS06430 | Not Available | + | 1350336 - 1351643 | 46705.2 |
| hypothetical protein | LPB140_RS06435 | Not Available | - | 1351669 - 1352388 | 26779.8 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | LPB140_RS06440 | Not Available | + | 1352464 - 1353360 | 31835.3 |
| hypothetical protein | LPB140_RS06445 | Not Available | - | 1353364 - 1353801 | 14242.2 |
| isocitrate lyase | LPB140_RS06450 | Not Available | - | 1354079 - 1355353 | 46350.6 |
| short-chain fatty acyl-coa regulator family protein | LPB140_RS06455 | Not Available | + | 1355589 - 1357034 | 53756.1 |
| o-antigen ligase family protein | LPB140_RS06460 | Not Available | + | 1357052 - 1358329 | 47808.4 |
| udp-n-acetyl-d-mannosamine dehydrogenase | LPB140_RS06465 | Not Available | - | 1358385 - 1359686 | 46853.8 |
| nucleotide sugar dehydrogenase | LPB140_RS06470 | Not Available | + | 1359995 - 1361308 | 47722.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.