Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein activator | LPB140_RS06325 | Not Available | - | 1331440 - 1332690 | 44658.3 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | LPB140_RS06330 | Not Available | + | 1332689 - 1333558 | 31604.0 |
| yran family protein | LPB140_RS06335 | Not Available | + | 1333560 - 1333922 | 13935.1 |
| glutathione synthase | LPB140_RS06340 | Not Available | + | 1333941 - 1334894 | 35091.4 |
| giy-yig nuclease family protein | LPB140_RS06345 | Not Available | + | 1334993 - 1335301 | 12176.7 |
| tyrosine recombinase xerc | LPB140_RS06350 | Not Available | - | 1335682 - 1336605 | 34121.4 |
| radical sam family heme chaperone hemw | LPB140_RS06355 | Not Available | - | 1336630 - 1337808 | 43524.8 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | LPB140_RS06360 | Not Available | - | 1337850 - 1338488 | 22784.9 |
| ribonuclease ph | LPB140_RS06365 | Not Available | - | 1338504 - 1339220 | 25675.7 |
| heat-inducible transcriptional repressor hrca | LPB140_RS06370 | Not Available | + | 1339304 - 1340347 | 37625.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.