Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xrta/pep-cterm system-associated atpase | LPB140_RS06275 | Not Available | + | 1320507 - 1321739 | 45680.3 |
| xrta system polysaccharide deacetylase | LPB140_RS06280 | Not Available | + | 1321809 - 1322669 | 32614.6 |
| femab family xrta/pep-cterm system-associated protein | LPB140_RS06285 | Not Available | + | 1322672 - 1323781 | 40681.5 |
| tigr03087 family pep-cterm/xrta system glycosyltransferase | LPB140_RS06290 | Not Available | + | 1323778 - 1324989 | 45287.1 |
| epsi domain-containing exosortase | LPB140_RS06295 | Not Available | + | 1324993 - 1326498 | 55692.5 |
| xrta/pep-cterm system amidotransferase | LPB140_RS06300 | Not Available | + | 1326509 - 1328401 | 70400.6 |
| trna pseudouridine(38-40) synthase trua | LPB140_RS06305 | Not Available | - | 1328421 - 1329164 | 27432.8 |
| methionyl-trna formyltransferase | LPB140_RS06310 | Not Available | - | 1329161 - 1330081 | 33061.8 |
| recombination mediator recr | LPB140_RS06315 | Not Available | + | 1330134 - 1330730 | 21858.5 |
| peptide deformylase | LPB140_RS06320 | Not Available | + | 1330836 - 1331360 | 19626.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.