Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit beta | LPB140_RS06075 | Not Available | - | 1285108 - 1286226 | 40732.6 |
| histidine phosphatase family protein | LPB140_RS06080 | Not Available | + | 1286397 - 1287053 | 24031.9 |
| hypothetical protein | LPB140_RS06085 | Not Available | + | 1287050 - 1287547 | 17955.5 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | LPB140_RS06090 | Not Available | + | 1287610 - 1288869 | 46813.2 |
| thioesterase family protein | LPB140_RS06095 | Not Available | - | 1288892 - 1289665 | 28326.5 |
| Trna-val | Not Available | Not Available | + | 1289746 - 1289820 | Not Available |
| acyl-coa dehydrogenase family protein | LPB140_RS06110 | Not Available | + | 1289984 - 1291150 | 42968.6 |
| histidinol dehydrogenase | LPB140_RS06115 | Not Available | - | 1291139 - 1292449 | 46819.2 |
| Trna-arg | Not Available | Not Available | + | 1292510 - 1292586 | Not Available |
| queuosine precursor transporter | LPB140_RS06125 | Not Available | + | 1292671 - 1293414 | 27697.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.