Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | LPB140_RS05975 | Not Available | - | 1257664 - 1258509 | 30546.3 |
| phosphoenolpyruvate--protein phosphotransferase | LPB140_RS05980 | Not Available | - | 1258650 - 1260911 | 83661.5 |
| duf465 domain-containing protein | LPB140_RS05985 | Not Available | - | 1261041 - 1261205 | 6383.89 |
| ydch family protein | LPB140_RS05990 | Not Available | + | 1261518 - 1261715 | 7601.3 |
| duf1465 family protein | LPB140_RS05995 | Not Available | + | 1261838 - 1262356 | 19425.0 |
| autotransporter assembly complex protein tama | LPB140_RS06000 | Not Available | + | 1262552 - 1265137 | 93607.6 |
| translocation/assembly module tamb domain-containing protein | LPB140_RS06005 | Not Available | + | 1265139 - 1269302 | 147963.0 |
| class i sam-dependent methyltransferase | LPB140_RS06010 | Not Available | + | 1269312 - 1270052 | 27475.7 |
| hypothetical protein | LPB140_RS06015 | Not Available | - | 1270049 - 1270258 | 8180.13 |
| translation elongation factor 4 | LPB140_RS06020 | Not Available | - | 1270438 - 1272243 | 66482.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.