Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | LPB140_RS05920 | Not Available | - | 1245330 - 1245920 | 22475.5 |
| sensor histidine kinase | LPB140_RS05925 | Not Available | + | 1246059 - 1247243 | 43928.7 |
| lytr/algr family response regulator transcription factor | LPB140_RS05930 | Not Available | + | 1247240 - 1248043 | 30681.1 |
| trna adenosine(34) deaminase tada | LPB140_RS05935 | Not Available | - | 1248095 - 1248523 | 15290.5 |
| 50s ribosomal protein l28 | LPB140_RS05940 | Not Available | + | 1248682 - 1248972 | 10482.8 |
| esterase-like activity of phytase family protein | LPB140_RS05945 | Not Available | - | 1248986 - 1250071 | 39698.5 |
| glycine zipper 2tm domain-containing protein | LPB140_RS05950 | Not Available | + | 1250230 - 1250661 | 15857.7 |
| l-glutamate gamma-semialdehyde dehydrogenase | LPB140_RS05955 | Not Available | + | 1250907 - 1253939 | 110251.0 |
| rne/rng family ribonuclease | LPB140_RS05960 | Not Available | - | 1254022 - 1257003 | 109534.0 |
| hypothetical protein | LPB140_RS05970 | Not Available | + | 1257451 - 1257663 | 7804.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.