Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l34 | LPB140_RS05870 | Not Available | - | 1235749 - 1235883 | 5081.35 |
| pgpgw domain-containing protein | LPB140_RS05875 | Not Available | - | 1236007 - 1236330 | 12227.6 |
| dna-3-methyladenine glycosylase family protein | LPB140_RS05880 | Not Available | - | 1236461 - 1237084 | 23009.3 |
| hypothetical protein | LPB140_RS05885 | Not Available | - | 1237084 - 1237959 | 32427.4 |
| trmh family rna methyltransferase | LPB140_RS05890 | Not Available | - | 1238066 - 1238806 | 26852.1 |
| Trna-tyr | Not Available | Not Available | + | 1238989 - 1239074 | Not Available |
| hypothetical protein | LPB140_RS05900 | Not Available | + | 1239432 - 1240412 | 36069.7 |
| nad(p)/fad-dependent oxidoreductase | LPB140_RS05905 | Not Available | + | 1240577 - 1241830 | 44953.1 |
| helicase-related protein | LPB140_RS05910 | Not Available | + | 1241840 - 1244767 | 107124.0 |
| ferredoxin fdxa | LPB140_RS05915 | Not Available | + | 1244859 - 1245197 | 12596.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.