Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein-export chaperone secb | LPB140_RS05815 | Not Available | - | 1226873 - 1227391 | 18723.8 |
| tim44/tima family putative adaptor protein | LPB140_RS05820 | Not Available | + | 1227759 - 1228433 | 25293.2 |
| murein transglycosylase a | LPB140_RS05825 | Not Available | + | 1228690 - 1229787 | 39135.6 |
| smr/muts family protein | LPB140_RS05830 | Not Available | + | 1229792 - 1230493 | 25380.6 |
| succinyl-diaminopimelate desuccinylase | LPB140_RS05835 | Not Available | - | 1230497 - 1231633 | 40227.1 |
| glutathione s-transferase family protein | LPB140_RS05840 | Not Available | - | 1231679 - 1232344 | 25561.3 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | LPB140_RS05845 | Not Available | - | 1232456 - 1233082 | 23252.1 |
| membrane protein insertase yidc | LPB140_RS05850 | Not Available | - | 1233082 - 1234866 | 66989.6 |
| membrane protein insertion efficiency factor yidd | LPB140_RS05855 | Not Available | - | 1234922 - 1235131 | 8006.95 |
| ribonuclease p protein component | LPB140_RS05860 | Not Available | - | 1235128 - 1235595 | 17713.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.