Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system ccda family antitoxin | LPB140_RS05755 | Not Available | - | 1216699 - 1216950 | 9459.18 |
| hypothetical protein | LPB140_RS05760 | Not Available | - | 1216996 - 1217613 | 23891.5 |
| 2-polyprenylphenol 6-hydroxylase | LPB140_RS05765 | Not Available | - | 1217610 - 1219157 | 57070.9 |
| class i sam-dependent methyltransferase | LPB140_RS05770 | Not Available | - | 1219167 - 1219898 | 27530.9 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | LPB140_RS05775 | Not Available | + | 1220003 - 1220815 | 30345.9 |
| 30s ribosomal protein s20 | LPB140_RS05780 | Not Available | + | 1220956 - 1221219 | 9765.91 |
| chromosomal replication initiator protein dnaa | LPB140_RS05795 | Not Available | + | 1221946 - 1223298 | 51047.8 |
| duf4136 domain-containing protein | LPB140_RS05800 | Not Available | - | 1223419 - 1224093 | 24876.2 |
| tryptophan--trna ligase | LPB140_RS05805 | Not Available | - | 1224215 - 1225207 | 36312.5 |
| murein biosynthesis integral membrane protein murj | LPB140_RS05810 | Not Available | - | 1225240 - 1226817 | 56817.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.