Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pilz domain-containing protein | LPB140_RS05555 | Not Available | - | 1179878 - 1180270 | 14252.2 |
| rna polymerase-binding protein dksa | LPB140_RS05560 | Not Available | - | 1180459 - 1180908 | 17242.2 |
| hypothetical protein | LPB140_RS12330 | Not Available | + | 1181298 - 1182500 | 36613.3 |
| serine--trna ligase | LPB140_RS05570 | Not Available | + | 1182675 - 1183955 | 47101.0 |
| 5'/3'-nucleotidase sure | LPB140_RS05575 | Not Available | + | 1183990 - 1184757 | 27602.8 |
| m23 family metallopeptidase | LPB140_RS05580 | Not Available | + | 1184956 - 1186056 | 38166.7 |
| potassium channel family protein | LPB140_RS05585 | Not Available | + | 1186053 - 1187150 | 40386.8 |
| duf1761 domain-containing protein | LPB140_RS05590 | Not Available | - | 1187183 - 1187584 | 14614.0 |
| 30s ribosomal protein s12 methylthiotransferase rimo | LPB140_RS05595 | Not Available | + | 1187688 - 1189055 | 50006.6 |
| metallophosphoesterase | LPB140_RS05600 | Not Available | - | 1189098 - 1189868 | 29032.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.