Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type transport auxiliary lipoprotein family protein | LPB140_RS05315 | Not Available | - | 1115927 - 1116529 | 22062.1 |
| mlad family protein | LPB140_RS05320 | Not Available | - | 1116537 - 1117505 | 34023.1 |
| abc transporter atp-binding protein | LPB140_RS05325 | Not Available | - | 1117569 - 1118357 | 28547.3 |
| mlae family abc transporter permease | LPB140_RS05330 | Not Available | - | 1118362 - 1119471 | 40220.5 |
| had family hydrolase | LPB140_RS05335 | Not Available | + | 1119640 - 1120320 | 26112.8 |
| slc13 family permease | LPB140_RS05340 | Not Available | - | 1120326 - 1121741 | 49579.2 |
| peptidoglycan editing factor pgef | LPB140_RS05345 | Not Available | - | 1121738 - 1122523 | 27942.4 |
| sdr family nad(p)-dependent oxidoreductase | LPB140_RS05350 | Not Available | + | 1122621 - 1123439 | 30000.0 |
| dmt family transporter | LPB140_RS05355 | Not Available | - | 1123511 - 1124509 | 35989.1 |
| threonine aldolase family protein | LPB140_RS05360 | Not Available | - | 1124506 - 1125555 | 37663.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.