Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | LPB140_RS05125 | Not Available | + | 1078047 - 1079285 | 45284.0 |
| tetratricopeptide repeat protein | LPB140_RS05130 | Not Available | + | 1079394 - 1080476 | 38639.4 |
| ydiy family protein | LPB140_RS05135 | Not Available | - | 1080494 - 1081459 | 34921.9 |
| endonuclease/exonuclease/phosphatase family protein | LPB140_RS05140 | Not Available | - | 1081552 - 1082505 | 36031.8 |
| thioredoxin-disulfide reductase | LPB140_RS05145 | Not Available | - | 1082636 - 1083610 | 34501.1 |
| 2fe-2s iron-sulfur cluster-binding protein | LPB140_RS05150 | Not Available | + | 1083783 - 1084100 | 11414.3 |
| hypothetical protein | LPB140_RS05155 | Not Available | - | 1084097 - 1084513 | 16229.5 |
| nupc/nupg family nucleoside cnt transporter | LPB140_RS05160 | Not Available | - | 1084551 - 1085828 | 45454.0 |
| nudix hydrolase | LPB140_RS05165 | Not Available | - | 1085832 - 1086641 | 29615.6 |
| duf4126 domain-containing protein | LPB140_RS05170 | Not Available | + | 1086762 - 1087373 | 21267.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.